Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.9■■□□□ 1.42
MSH5O43196 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC23.9■■□□□ 1.42
MSH5O43196 AL773604.1-201ENST00000617417 272 ntBASIC23.9■■□□□ 1.42
MSH5O43196 TP73-AS1-207ENST00000624167 988 ntBASIC23.9■■□□□ 1.42
MSH5O43196 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC23.9■■□□□ 1.42
MSH5O43196 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
MSH5O43196 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC23.9■■□□□ 1.42
MSH5O43196 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
MSH5O43196 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
MSH5O43196 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
MSH5O43196 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
MSH5O43196 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
MSH5O43196 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
MSH5O43196 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
MSH5O43196 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
MSH5O43196 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.41
MSH5O43196 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
MSH5O43196 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
MSH5O43196 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
MSH5O43196 FAM220CP-201ENST00000395253 831 ntBASIC23.89■■□□□ 1.41
MSH5O43196 AL365338.1-201ENST00000422282 858 ntBASIC23.89■■□□□ 1.41
MSH5O43196 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.89■■□□□ 1.41
MSH5O43196 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC23.89■■□□□ 1.41
MSH5O43196 MTND1P34-201ENST00000438556 671 ntBASIC23.89■■□□□ 1.41
MSH5O43196 FAM197Y8-203ENST00000450145 560 ntBASIC23.89■■□□□ 1.41
MSH5O43196 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC23.89■■□□□ 1.41
MSH5O43196 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
MSH5O43196 RNU2-45P-201ENST00000516068 187 ntBASIC23.89■■□□□ 1.41
MSH5O43196 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC23.89■■□□□ 1.41
MSH5O43196 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC23.89■■□□□ 1.41
MSH5O43196 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.89■■□□□ 1.41
MSH5O43196 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC23.89■■□□□ 1.41
MSH5O43196 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.89■■□□□ 1.41
MSH5O43196 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.89■■□□□ 1.41
MSH5O43196 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MSH5O43196 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC23.88■■□□□ 1.41
MSH5O43196 NIPA2P4-201ENST00000523928 1341 ntBASIC23.88■■□□□ 1.41
MSH5O43196 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
MSH5O43196 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 CDY12P-201ENST00000440679 1015 ntBASIC23.88■■□□□ 1.41
MSH5O43196 CDY13P-201ENST00000445813 1015 ntBASIC23.88■■□□□ 1.41
MSH5O43196 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.88■■□□□ 1.41
MSH5O43196 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.88■■□□□ 1.41
MSH5O43196 AC005730.2-201ENST00000564549 1184 ntBASIC23.88■■□□□ 1.41
MSH5O43196 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.88■■□□□ 1.41
MSH5O43196 AC080013.3-201ENST00000606839 578 ntBASIC23.88■■□□□ 1.41
MSH5O43196 AL691403.2-201ENST00000618460 490 ntBASIC23.88■■□□□ 1.41
MSH5O43196 REXO1L6P-202ENST00000619970 1078 ntBASIC23.88■■□□□ 1.41
MSH5O43196 AL512353.2-201ENST00000448759 1962 ntBASIC23.88■■□□□ 1.41
MSH5O43196 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
MSH5O43196 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.88■■□□□ 1.41
MSH5O43196 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
MSH5O43196 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.88■■□□□ 1.41
MSH5O43196 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC23.88■■□□□ 1.41
MSH5O43196 AC104417.2-201ENST00000562989 1793 ntBASIC23.88■■□□□ 1.41
MSH5O43196 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
MSH5O43196 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC23.88■■□□□ 1.41
MSH5O43196 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
MSH5O43196 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.87■■□□□ 1.41
MSH5O43196 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC23.87■■□□□ 1.41
MSH5O43196 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 AC073592.3-201ENST00000625118 1834 ntBASIC23.87■■□□□ 1.41
MSH5O43196 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 AL645608.8-201ENST00000606034 2086 ntBASIC23.87■■□□□ 1.41
MSH5O43196 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
MSH5O43196 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
MSH5O43196 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 LSM5-204ENST00000409909 740 ntTSL 2 BASIC23.87■■□□□ 1.41
MSH5O43196 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.87■■□□□ 1.41
MSH5O43196 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.87■■□□□ 1.41
MSH5O43196 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.87■■□□□ 1.41
MSH5O43196 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC23.87■■□□□ 1.41
MSH5O43196 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.87■■□□□ 1.41
MSH5O43196 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC23.87■■□□□ 1.41
MSH5O43196 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
MSH5O43196 TERC-201ENST00000602385 541 ntBASIC23.87■■□□□ 1.41
MSH5O43196 TTR-204ENST00000610404 1040 ntTSL 5 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms