Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.61■□□□□ 0.41
AP3B1O00203 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3B1O00203 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.61■□□□□ 0.41
AP3B1O00203 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
AP3B1O00203 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.61■□□□□ 0.41
AP3B1O00203 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 KRT18P1-202ENST00000452408 1331 ntBASIC17.61■□□□□ 0.41
AP3B1O00203 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3B1O00203 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.61■□□□□ 0.41
AP3B1O00203 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP3B1O00203 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
AP3B1O00203 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3B1O00203 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3B1O00203 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
AP3B1O00203 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.6■□□□□ 0.41
AP3B1O00203 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3B1O00203 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.6■□□□□ 0.41
AP3B1O00203 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 STK19B-204ENST00000512515 211 ntBASIC17.6■□□□□ 0.41
AP3B1O00203 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.6■□□□□ 0.41
AP3B1O00203 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.6■□□□□ 0.41
AP3B1O00203 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
AP3B1O00203 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
AP3B1O00203 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.6■□□□□ 0.41
AP3B1O00203 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3B1O00203 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP3B1O00203 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3B1O00203 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
AP3B1O00203 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.6■□□□□ 0.41
AP3B1O00203 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3B1O00203 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
AP3B1O00203 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
AP3B1O00203 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3B1O00203 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
AP3B1O00203 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.59■□□□□ 0.41
AP3B1O00203 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 AC009336.1-201ENST00000608941 1553 ntBASIC17.59■□□□□ 0.41
AP3B1O00203 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.59■□□□□ 0.41
AP3B1O00203 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 AC233702.3-201ENST00000578656 1387 ntBASIC17.59■□□□□ 0.41
AP3B1O00203 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
AP3B1O00203 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
AP3B1O00203 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3B1O00203 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3B1O00203 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 AC124947.2-201ENST00000547118 1133 ntBASIC17.59■□□□□ 0.41
AP3B1O00203 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.59■□□□□ 0.41
AP3B1O00203 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3B1O00203 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3B1O00203 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3B1O00203 AD001527.2-201ENST00000622994 785 ntBASIC17.59■□□□□ 0.41
AP3B1O00203 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.59■□□□□ 0.41
AP3B1O00203 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3B1O00203 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.59■□□□□ 0.41
AP3B1O00203 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AP3B1O00203 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3B1O00203 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
AP3B1O00203 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3B1O00203 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3B1O00203 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
AP3B1O00203 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
AP3B1O00203 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.58■□□□□ 0.41
AP3B1O00203 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3B1O00203 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3B1O00203 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
AP3B1O00203 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms