Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3BA6NDS4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.64■□□□□ 0.42
TBC1D3BA6NDS4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3BA6NDS4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3BA6NDS4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TBC1D3BA6NDS4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 AP006288.1-201ENST00000446065 395 ntBASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 ALG1L5P-201ENST00000482043 771 ntBASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 AC010507.1-201ENST00000633895 436 ntBASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 AL590787.1-201ENST00000568856 1315 ntBASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 REXO1L11P-201ENST00000620964 1927 ntBASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TBC1D3BA6NDS4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 YBX1P5-201ENST00000509441 847 ntBASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 OR7E47P-204ENST00000575924 449 ntBASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 AL078644.1-201ENST00000609881 752 ntBASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 AL135999.2-201ENST00000622438 1686 ntBASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3BA6NDS4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.62■□□□□ 0.41
TBC1D3BA6NDS4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms