Protein–RNA interactions for Protein: A2RUS2

DENND3, DENN domain-containing protein 3, humanhuman

Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3A2RUS2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DENND3A2RUS2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DENND3A2RUS2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.27■□□□□ 0.67
DENND3A2RUS2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 AC003669.1-201ENST00000334569 611 ntBASIC19.26■□□□□ 0.67
DENND3A2RUS2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.26■□□□□ 0.67
DENND3A2RUS2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 AC005593.1-201ENST00000624894 515 ntBASIC19.26■□□□□ 0.67
DENND3A2RUS2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.26■□□□□ 0.67
DENND3A2RUS2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND3A2RUS2 SIGLEC16-201ENST00000599858 1437 ntBASIC19.25■□□□□ 0.67
DENND3A2RUS2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 PRYP5-201ENST00000451909 266 ntBASIC19.25■□□□□ 0.67
DENND3A2RUS2 RNA5SP416-201ENST00000516838 111 ntBASIC19.25■□□□□ 0.67
DENND3A2RUS2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DENND3A2RUS2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DENND3A2RUS2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 AL020989.1-201ENST00000422979 469 ntBASIC19.24■□□□□ 0.67
DENND3A2RUS2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 STK19B-204ENST00000512515 211 ntBASIC19.24■□□□□ 0.67
DENND3A2RUS2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 AL139327.4-201ENST00000612362 153 ntBASIC19.24■□□□□ 0.67
DENND3A2RUS2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 PGM5P2-202ENST00000637225 1043 ntBASIC19.24■□□□□ 0.67
DENND3A2RUS2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
DENND3A2RUS2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DENND3A2RUS2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms