Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL121912.1-201ENST00000603683 238 ntBASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AD000864.1-201ENST00000624076 2295 ntBASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CROCCP1-201ENST00000426910 5675 ntBASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AP001094.4-201ENST00000579008 2176 ntBASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SAPCD2P3-201ENST00000455031 850 ntBASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MIR5100-201ENST00000579544 119 ntBASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC116407.2-201ENST00000613639 860 ntBASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TCRBV4S1A1TA0A5B7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MTCL1P1-201ENST00000446207 792 ntBASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.02□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC009078.2-202ENST00000463353 338 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms