Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC092171.3-201ENST00000610122 2651 ntBASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AL031133.1-201ENST00000406807 723 ntBASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 KRT8P26-201ENST00000534154 1276 ntBASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC011840.4-201ENST00000578471 627 ntBASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC090616.6-201ENST00000582640 721 ntBASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TCRBV7S3A2A0A539 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 STK25P1-201ENST00000585406 838 ntBASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 AC078925.2-201ENST00000624013 1973 ntBASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
TCRBV7S3A2A0A539 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.68■□□□□ 0.42
TCRBV7S3A2A0A539 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms