Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 HOXB1-202ENST00000577092 1414 ntBASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 HOMER2P1-201ENST00000455653 964 ntBASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 AC063952.2-201ENST00000498792 1227 ntBASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 AC026691.1-201ENST00000602502 2017 ntBASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP4B1Q9Y6B7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 AP000593.1-201ENST00000393668 712 ntBASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 MIR1224-201ENST00000408193 85 ntBASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 KRT18P23-201ENST00000435622 1283 ntBASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 AL441883.1-201ENST00000566170 1045 ntBASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 HYMAI-201ENST00000635591 3347 ntBASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP4B1Q9Y6B7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AC068418.2-201ENST00000577309 3703 ntBASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AC092647.4-201ENST00000457211 535 ntBASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AC010331.1-201ENST00000611423 582 ntBASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AC099343.3-201ENST00000605834 2503 ntBASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AP4B1Q9Y6B7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms