Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 FAM220CP-201ENST00000395253 831 ntBASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 FAM215A-202ENST00000632077 792 ntBASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB1Q9Y5F3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 MYCLP1-201ENST00000372451 1075 ntBASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 HNRNPDP1-201ENST00000439535 754 ntBASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 FGFR3P6-201ENST00000457012 610 ntBASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 AL355877.3-201ENST00000622820 899 ntBASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB1Q9Y5F3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 AC103564.2-201ENST00000432853 1299 ntBASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 IGHV3-52-201ENST00000519770 353 ntBASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 AL023806.1-201ENST00000603994 1649 ntBASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDHB1Q9Y5F3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB1Q9Y5F3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB1Q9Y5F3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms