Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 AC243591.1-201ENST00000452967 1364 ntBASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHB11Q9Y5F2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 INTS4P1-201ENST00000438455 1935 ntBASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 FAM215A-202ENST00000632077 792 ntBASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB11Q9Y5F2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 FZD10-202ENST00000539839 3282 ntBASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 FGFR3P6-201ENST00000457012 610 ntBASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 AC122714.2-201ENST00000502787 707 ntBASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB11Q9Y5F2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB11Q9Y5F2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms