Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTCBQ9Y3I0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.82■■□□□ 1.08
RTCBQ9Y3I0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RTCBQ9Y3I0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 FAM207CP-201ENST00000443486 507 ntBASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 AL161645.1-201ENST00000622716 1255 ntBASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCBQ9Y3I0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 GK-202ENST00000378941 458 ntTSL 3 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 TREML5P-201ENST00000421694 576 ntBASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 HLA-J-202ENST00000469281 1241 ntBASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RTCBQ9Y3I0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 IGHV3-62-201ENST00000520057 340 ntBASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 SLC25A39P2-201ENST00000537614 270 ntBASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 LINC02560-201ENST00000596379 459 ntBASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 AC008761.3-201ENST00000624803 892 ntBASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.79■■□□□ 1.08
RTCBQ9Y3I0 AC008677.1-201ENST00000519230 1561 ntBASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 IGHV3-42-201ENST00000520410 361 ntBASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 AC026150.2-201ENST00000564693 1156 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms