Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC239809.2-201ENST00000415381 517 ntBASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC093827.2-201ENST00000512654 315 ntBASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 HLA-A-209ENST00000638375 975 ntBASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 KRT8P50-201ENST00000562022 1438 ntBASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRCH1Q9Y2L9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 AC099343.3-201ENST00000605834 2503 ntBASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 AL121829.2-201ENST00000620908 328 ntBASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 FAM45BP-202ENST00000592932 1624 ntBASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 AL109659.2-201ENST00000606809 1674 ntBASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.59■□□□□ 0.25
LRCH1Q9Y2L9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms