Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP20Q9Y2K6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP20Q9Y2K6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP20Q9Y2K6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 PP12613-201ENST00000424958 2230 ntBASIC19.11■□□□□ 0.65
USP20Q9Y2K6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 AC139887.3-201ENST00000568585 713 ntBASIC19.11■□□□□ 0.65
USP20Q9Y2K6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 AF228730.7-201ENST00000641842 219 ntBASIC19.11■□□□□ 0.65
USP20Q9Y2K6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP20Q9Y2K6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 PRYP5-201ENST00000451909 266 ntBASIC19.1■□□□□ 0.65
USP20Q9Y2K6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 AC097637.2-201ENST00000624096 1997 ntBASIC19.1■□□□□ 0.65
USP20Q9Y2K6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP20Q9Y2K6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 AL645608.8-201ENST00000606034 2086 ntBASIC19.09■□□□□ 0.65
USP20Q9Y2K6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 SIGLEC30P-201ENST00000455569 941 ntBASIC19.09■□□□□ 0.65
USP20Q9Y2K6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 BX640515.1-201ENST00000617215 977 ntBASIC19.09■□□□□ 0.65
USP20Q9Y2K6 AC008735.5-201ENST00000623544 497 ntBASIC19.09■□□□□ 0.65
USP20Q9Y2K6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP20Q9Y2K6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP20Q9Y2K6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
USP20Q9Y2K6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms