Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.13□□□□□ -0.15
FOXA2Q9Y261 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA2Q9Y261 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FOXA2Q9Y261 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
FOXA2Q9Y261 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 AC002558.1-201ENST00000488906 803 ntBASIC14.12□□□□□ -0.15
FOXA2Q9Y261 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 AL139327.4-201ENST00000612362 153 ntBASIC14.12□□□□□ -0.15
FOXA2Q9Y261 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXA2Q9Y261 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 AC096633.1-201ENST00000422446 749 ntBASIC14.11□□□□□ -0.15
FOXA2Q9Y261 UPK3BP1-201ENST00000428678 509 ntBASIC14.11□□□□□ -0.15
FOXA2Q9Y261 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 MTCL1P1-201ENST00000446207 792 ntBASIC14.11□□□□□ -0.15
FOXA2Q9Y261 VENTXP7-201ENST00000475503 772 ntBASIC14.11□□□□□ -0.15
FOXA2Q9Y261 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 AL592071.1-201ENST00000611956 408 ntBASIC14.11□□□□□ -0.15
FOXA2Q9Y261 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 AC124067.4-201ENST00000519691 2379 ntBASIC14.11□□□□□ -0.15
FOXA2Q9Y261 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXA2Q9Y261 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 AC016734.2-201ENST00000624325 1377 ntBASIC14.1□□□□□ -0.15
FOXA2Q9Y261 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA2Q9Y261 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms