Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 REXO1L3P-201ENST00000622202 1288 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 AC134684.3-201ENST00000641758 218 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 EGFEM1P-202ENST00000431685 1563 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 AP001160.2-201ENST00000596071 487 ntBASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 AL645728.2-201ENST00000641974 660 ntBASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNPO2Q9UMS6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 AC211486.1-202ENST00000416371 468 ntBASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 ALG1L5P-201ENST00000482043 771 ntBASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 AC211476.1-201ENST00000503899 468 ntBASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 ELL2P1-201ENST00000413990 1906 ntBASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SYNPO2Q9UMS6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 SLC25A1P3-201ENST00000395415 828 ntBASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 AC116353.5-201ENST00000638148 1699 ntBASIC19.91■□□□□ 0.78
SYNPO2Q9UMS6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms