Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AC055717.3-201ENST00000622967 595 ntBASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 AC073592.4-201ENST00000623827 446 ntBASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 AL645608.8-201ENST00000606034 2086 ntBASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HDAC6Q9UBN7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HDAC6Q9UBN7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 PRORSD1P-202ENST00000563365 2154 ntBASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AC138932.1-201ENST00000534164 6830 ntBASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AC007967.2-201ENST00000432613 625 ntBASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AC009947.1-201ENST00000444350 727 ntBASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AC010327.4-202ENST00000591484 748 ntBASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AL139424.1-201ENST00000607572 797 ntBASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HDAC6Q9UBN7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDAC6Q9UBN7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms