Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PPARGC1AQ9UBK2 REXO1L11P-201ENST00000620964 1927 ntBASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 AC002558.1-201ENST00000488906 803 ntBASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.19■□□□□ 0.5
PPARGC1AQ9UBK2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AL645608.8-201ENST00000606034 2086 ntBASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AL732292.2-201ENST00000609649 430 ntBASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AC019129.2-201ENST00000609837 1235 ntBASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AD001527.2-201ENST00000622994 785 ntBASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 AC080080.1-201ENST00000625121 2420 ntBASIC18.18■□□□□ 0.5
PPARGC1AQ9UBK2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 AL049757.1-201ENST00000616842 1596 ntBASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PPARGC1AQ9UBK2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms