Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 AC008741.2-201ENST00000612792 3115 ntBASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 PVRIG2P-201ENST00000435460 978 ntBASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 AC034232.1-201ENST00000506026 1064 ntBASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 CROCCP2-202ENST00000412962 2773 ntBASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.1■□□□□ 0.65
CALCOCO1Q9P1Z2 AC093677.2-201ENST00000600169 1863 ntBASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 HBZP1-201ENST00000354915 429 ntBASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 HLA-F-220ENST00000434407 884 ntBASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 CLEC4GP1-201ENST00000596555 870 ntBASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 PP12613-201ENST00000424958 2230 ntBASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.09■□□□□ 0.65
CALCOCO1Q9P1Z2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 AC005052.1-201ENST00000625181 2492 ntBASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CALCOCO1Q9P1Z2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 AL450487.1-201ENST00000426799 995 ntBASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CALCOCO1Q9P1Z2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms