Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 AL031432.5-201ENST00000641059 760 ntBASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.63■□□□□ 0.25
CCM2LQ9NUG4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AC140113.3-201ENST00000605663 199 ntBASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AC069148.1-201ENST00000608741 768 ntBASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AC005332.1-201ENST00000577698 1310 ntBASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 AC026691.1-201ENST00000602502 2017 ntBASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCM2LQ9NUG4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 PCDHA1-201ENST00000378133 2726 ntBASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 LYSMD4-203ENST00000378904 2122 ntBASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCM2LQ9NUG4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms