Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXD4L1Q9NU39 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 KRT8P9-201ENST00000558927 1449 ntBASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 TSPY15P-201ENST00000457163 923 ntBASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 MTND1P8-201ENST00000571424 950 ntBASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 AL157888.1-201ENST00000631930 593 ntBASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 METTL15-211ENST00000634762 718 ntTSL 5 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXD4L1Q9NU39 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 CYP2D8P-201ENST00000433633 1490 ntBASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AC083964.1-201ENST00000607549 630 ntBASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AC080188.3-201ENST00000624842 748 ntBASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXD4L1Q9NU39 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 KRT8P47-201ENST00000604727 1398 ntBASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 FAM220BP-201ENST00000377689 816 ntBASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AL355075.4-201ENST00000554988 638 ntBASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AL021368.1-201ENST00000607490 540 ntBASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AC097520.1-201ENST00000624435 385 ntBASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms