Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CYLDQ9NQC7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 AC016396.2-201ENST00000562575 1417 ntBASIC18.44■□□□□ 0.54
CYLDQ9NQC7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 KLF4P1-201ENST00000412782 1185 ntBASIC18.44■□□□□ 0.54
CYLDQ9NQC7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 AC018712.1-201ENST00000455767 687 ntBASIC18.44■□□□□ 0.54
CYLDQ9NQC7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 RNA5SP419-201ENST00000515908 135 ntBASIC18.44■□□□□ 0.54
CYLDQ9NQC7 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 AL139288.1-201ENST00000623748 933 ntBASIC18.44■□□□□ 0.54
CYLDQ9NQC7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 HLA-A-201ENST00000376802 1334 ntBASIC18.44■□□□□ 0.54
CYLDQ9NQC7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.44■□□□□ 0.54
CYLDQ9NQC7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 AC080080.1-201ENST00000625121 2420 ntBASIC18.43■□□□□ 0.54
CYLDQ9NQC7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 AC009336.1-201ENST00000608941 1553 ntBASIC18.43■□□□□ 0.54
CYLDQ9NQC7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 AL356309.3-201ENST00000624132 1934 ntBASIC18.43■□□□□ 0.54
CYLDQ9NQC7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 AF186996.4-201ENST00000467186 377 ntBASIC18.43■□□□□ 0.54
CYLDQ9NQC7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 STK19B-204ENST00000512515 211 ntBASIC18.43■□□□□ 0.54
CYLDQ9NQC7 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 AL773604.1-201ENST00000617417 272 ntBASIC18.43■□□□□ 0.54
CYLDQ9NQC7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CYLDQ9NQC7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.42■□□□□ 0.54
CYLDQ9NQC7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms