Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC20.65■□□□□ 0.9
RTN4Q9NQC3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTN4Q9NQC3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.64■□□□□ 0.89
RTN4Q9NQC3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 Z85996.1-201ENST00000494644 937 ntBASIC20.64■□□□□ 0.89
RTN4Q9NQC3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 AC104771.1-201ENST00000603335 964 ntBASIC20.64■□□□□ 0.89
RTN4Q9NQC3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 AC068587.9-201ENST00000641814 219 ntBASIC20.64■□□□□ 0.89
RTN4Q9NQC3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 AC022188.1-201ENST00000620960 1664 ntBASIC20.64■□□□□ 0.89
RTN4Q9NQC3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.64■□□□□ 0.89
RTN4Q9NQC3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 MTDHP1-201ENST00000605323 784 ntBASIC20.63■□□□□ 0.89
RTN4Q9NQC3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTN4Q9NQC3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms