Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NSUN5P1-202ENST00000421140 1535 ntBASIC16.68■□□□□ 0.26
BRF2Q9HAW0 NSUN5P2-203ENST00000457352 1529 ntBASIC16.68■□□□□ 0.26
BRF2Q9HAW0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BRF2Q9HAW0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 LINC00265-3P-201ENST00000447588 903 ntBASIC16.67■□□□□ 0.26
BRF2Q9HAW0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 BNIP3P18-201ENST00000593976 575 ntBASIC16.67■□□□□ 0.26
BRF2Q9HAW0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 AC069148.1-201ENST00000608741 768 ntBASIC16.67■□□□□ 0.26
BRF2Q9HAW0 AC091076.1-201ENST00000610741 619 ntBASIC16.67■□□□□ 0.26
BRF2Q9HAW0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 AC022211.2-201ENST00000585075 2527 ntBASIC16.67■□□□□ 0.26
BRF2Q9HAW0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BRF2Q9HAW0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 AC132938.5-201ENST00000624980 1813 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 KLF4P1-201ENST00000412782 1185 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 POM121L3P-201ENST00000419331 1163 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 AC096582.2-201ENST00000510860 516 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 MIR3180-1-201ENST00000580374 94 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 MIR3180-3-201ENST00000584616 94 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 NPAP1P7-201ENST00000613027 823 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 AC009053.2-201ENST00000563701 2365 ntBASIC16.66■□□□□ 0.26
BRF2Q9HAW0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.66■□□□□ 0.26
BRF2Q9HAW0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms