Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 AC024563.2-201ENST00000603282 481 ntBASIC21.42■■□□□ 1.02
UPF2Q9HAU5 KRT89P-201ENST00000620027 1478 ntBASIC21.42■■□□□ 1.02
UPF2Q9HAU5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF2Q9HAU5 DOC2GP-204ENST00000639052 2548 ntBASIC21.42■■□□□ 1.02
UPF2Q9HAU5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 PRORSD1P-201ENST00000295112 541 ntBASIC21.41■■□□□ 1.02
UPF2Q9HAU5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 LINC02012-201ENST00000608206 1725 ntBASIC21.41■■□□□ 1.02
UPF2Q9HAU5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
UPF2Q9HAU5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 AL139327.4-201ENST00000612362 153 ntBASIC21.4■■□□□ 1.02
UPF2Q9HAU5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.4■■□□□ 1.02
UPF2Q9HAU5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms