Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR1BQ9H9Y6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 AC005336.2-201ENST00000593183 939 ntBASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR1BQ9H9Y6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 HEIH-201ENST00000623091 1652 ntBASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 AC135776.1-201ENST00000319817 2481 ntBASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 AC145285.3-201ENST00000564603 959 ntBASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 AP001269.4-201ENST00000609611 512 ntBASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 AC027601.4-201ENST00000611259 610 ntBASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR1BQ9H9Y6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 281.4 ms