Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.7■□□□□ 0.26
PIF1Q9H611 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.7■□□□□ 0.26
PIF1Q9H611 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PIF1Q9H611 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.7■□□□□ 0.26
PIF1Q9H611 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.7■□□□□ 0.26
PIF1Q9H611 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PIF1Q9H611 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.69■□□□□ 0.26
PIF1Q9H611 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 CICP6-201ENST00000457191 2729 ntBASIC16.69■□□□□ 0.26
PIF1Q9H611 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PIF1Q9H611 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PIF1Q9H611 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PIF1Q9H611 DDX43P3-201ENST00000441064 443 ntBASIC16.69■□□□□ 0.26
PIF1Q9H611 ECEL1P2-202ENST00000465689 757 ntBASIC16.69■□□□□ 0.26
PIF1Q9H611 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
PIF1Q9H611 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.69■□□□□ 0.26
PIF1Q9H611 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PIF1Q9H611 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PIF1Q9H611 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.69■□□□□ 0.26
PIF1Q9H611 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PIF1Q9H611 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PIF1Q9H611 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PIF1Q9H611 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.68■□□□□ 0.26
PIF1Q9H611 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PIF1Q9H611 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PIF1Q9H611 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PIF1Q9H611 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.68■□□□□ 0.26
PIF1Q9H611 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.68■□□□□ 0.26
PIF1Q9H611 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 NFIC-211ENST00000641145 8399 ntBASIC16.68■□□□□ 0.26
PIF1Q9H611 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PIF1Q9H611 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PIF1Q9H611 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms