Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 KRT8P9-201ENST00000558927 1449 ntBASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 AC060834.1-201ENST00000443027 2032 ntBASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 ECEL1P3-201ENST00000427961 737 ntBASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 TSPY15P-201ENST00000457163 923 ntBASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 AC112698.1-201ENST00000510299 916 ntBASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.43■□□□□ 0.06
COMMD4Q9H0A8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 AC116353.5-201ENST00000638148 1699 ntBASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 KRT18P48-201ENST00000434763 852 ntBASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.42■□□□□ 0.06
COMMD4Q9H0A8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COMMD4Q9H0A8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms