Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 AC139713.2-201ENST00000641328 2723 ntBASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 AL450487.1-201ENST00000426799 995 ntBASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 UNC93B7-201ENST00000509439 705 ntBASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 AC148477.5-201ENST00000625164 1645 ntBASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
POLR1EQ9GZS1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 AL356309.3-201ENST00000624132 1934 ntBASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.66■□□□□ 0.42
POLR1EQ9GZS1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 FGFR3P6-201ENST00000457012 610 ntBASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 SCARNA2-201ENST00000458748 420 ntBASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 KRT126P-201ENST00000549467 1181 ntBASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.65■□□□□ 0.42
POLR1EQ9GZS1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms