Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NKX6-2Q9C056 AC092368.3-202ENST00000574180 1591 ntBASIC14.17□□□□□ -0.14
NKX6-2Q9C056 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 AC138035.3-201ENST00000622706 2791 ntBASIC14.16□□□□□ -0.14
NKX6-2Q9C056 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 ZNRF2P3-201ENST00000424200 374 ntBASIC14.16□□□□□ -0.14
NKX6-2Q9C056 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 AC105036.2-201ENST00000569468 176 ntBASIC14.16□□□□□ -0.14
NKX6-2Q9C056 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 PHGDH-209ENST00000641074 1780 ntBASIC14.16□□□□□ -0.14
NKX6-2Q9C056 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NKX6-2Q9C056 HTR7P1-201ENST00000538670 1336 ntBASIC14.15□□□□□ -0.14
NKX6-2Q9C056 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 DUSP5P2-201ENST00000426873 1033 ntBASIC14.15□□□□□ -0.14
NKX6-2Q9C056 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.15□□□□□ -0.14
NKX6-2Q9C056 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 C1QL1P1-201ENST00000568105 661 ntBASIC14.15□□□□□ -0.14
NKX6-2Q9C056 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 AC092171.3-201ENST00000610122 2651 ntBASIC14.15□□□□□ -0.14
NKX6-2Q9C056 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NKX6-2Q9C056 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.15
NKX6-2Q9C056 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.15□□□□□ -0.15
NKX6-2Q9C056 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
NKX6-2Q9C056 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 AP002414.2-201ENST00000591780 3365 ntBASIC14.14□□□□□ -0.15
NKX6-2Q9C056 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 AC006058.4-201ENST00000624016 1670 ntBASIC14.14□□□□□ -0.15
NKX6-2Q9C056 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX6-2Q9C056 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms