Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CNTNAP3Q9BZ76 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 AL163051.1-201ENST00000569214 1512 ntBASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 INE1-201ENST00000456273 945 ntBASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 RN7SL190P-201ENST00000582519 257 ntBASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.56■□□□□ 0.24
CNTNAP3Q9BZ76 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 NCF1C-201ENST00000438382 1427 ntBASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 AL355306.1-201ENST00000415580 579 ntBASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 AL671277.1-201ENST00000429656 993 ntBASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 AC007967.3-201ENST00000434308 558 ntBASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.55■□□□□ 0.24
CNTNAP3Q9BZ76 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 Z82202.1-201ENST00000623446 1880 ntBASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 AC120498.9-201ENST00000339021 3867 ntBASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 AC241585.1-201ENST00000433527 519 ntBASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 FAM86C2P-203ENST00000528684 1004 ntBASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CNTNAP3Q9BZ76 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms