Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 AR-207ENST00000612010 3896 ntTSL 5 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
KRTAP4-3Q9BYR4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 SIGLEC16-201ENST00000599858 1437 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RPS2P28-201ENST00000314255 741 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RPSAP43-201ENST00000402237 625 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AC103564.2-201ENST00000432853 1299 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RPS15P9-201ENST00000494093 319 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AC136632.2-201ENST00000512891 861 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 OR7E47P-204ENST00000575924 449 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 MIR4751-201ENST00000578027 74 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AL078644.1-201ENST00000609881 752 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AC009336.1-201ENST00000608941 1553 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 AL135999.2-201ENST00000622438 1686 ntBASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC5.91□□□□□ -1.46
KRTAP4-3Q9BYR4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC5.9□□□□□ -1.46
KRTAP4-3Q9BYR4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms