Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.08■□□□□ 0
COL12A1Q99715 AC022210.1-201ENST00000449856 793 ntBASIC15.08■□□□□ 0
COL12A1Q99715 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.08■□□□□ 0
COL12A1Q99715 RHOQP1-201ENST00000555758 579 ntBASIC15.08■□□□□ 0
COL12A1Q99715 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
COL12A1Q99715 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
COL12A1Q99715 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
COL12A1Q99715 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.08■□□□□ 0
COL12A1Q99715 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL12A1Q99715 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.08■□□□□ 0
COL12A1Q99715 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
COL12A1Q99715 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 AKAP8P1-201ENST00000434743 1349 ntBASIC15.07■□□□□ 0
COL12A1Q99715 PHGDH-209ENST00000641074 1780 ntBASIC15.07■□□□□ 0
COL12A1Q99715 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COL12A1Q99715 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.07■□□□□ 0
COL12A1Q99715 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.07■□□□□ 0
COL12A1Q99715 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
COL12A1Q99715 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.07■□□□□ 0
COL12A1Q99715 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.07■□□□□ 0
COL12A1Q99715 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.07■□□□□ 0
COL12A1Q99715 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.07■□□□□ 0
COL12A1Q99715 STK25P1-201ENST00000585406 838 ntBASIC15.07■□□□□ 0
COL12A1Q99715 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 AC008494.3-201ENST00000606615 944 ntBASIC15.07■□□□□ 0
COL12A1Q99715 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.07■□□□□ 0
COL12A1Q99715 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.07■□□□□ 0
COL12A1Q99715 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL12A1Q99715 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COL12A1Q99715 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
COL12A1Q99715 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.06■□□□□ 0
COL12A1Q99715 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 AL391825.1-201ENST00000457671 1364 ntBASIC15.06■□□□□ 0
COL12A1Q99715 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.06■□□□□ 0
COL12A1Q99715 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.06■□□□□ 0
COL12A1Q99715 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.06■□□□□ 0
COL12A1Q99715 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.06■□□□□ 0
COL12A1Q99715 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.06■□□□□ 0
COL12A1Q99715 MIR6869-201ENST00000619434 62 ntBASIC15.06■□□□□ 0
COL12A1Q99715 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.06■□□□□ 0
COL12A1Q99715 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COL12A1Q99715 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COL12A1Q99715 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COL12A1Q99715 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.06■□□□□ 0
COL12A1Q99715 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.06■□□□□ 0
COL12A1Q99715 RN7SL837P-201ENST00000463010 287 ntBASIC15.06■□□□□ 0
COL12A1Q99715 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
COL12A1Q99715 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
COL12A1Q99715 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.06■□□□□ 0
COL12A1Q99715 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
COL12A1Q99715 AC126763.1-201ENST00000552015 2118 ntBASIC15.06■□□□□ 0
COL12A1Q99715 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.06■□□□□ 0
COL12A1Q99715 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 AL355994.2-201ENST00000447882 704 ntBASIC15.06■□□□□ 0
COL12A1Q99715 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
COL12A1Q99715 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
COL12A1Q99715 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.06■□□□□ 0
COL12A1Q99715 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.05■□□□□ 0
COL12A1Q99715 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL12A1Q99715 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms