Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 AL135999.2-201ENST00000622438 1686 ntBASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 AC046185.3-201ENST00000623228 1824 ntBASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 GPR89P-201ENST00000407924 1495 ntBASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 AP001160.2-201ENST00000596071 487 ntBASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 MTDHP5-201ENST00000598980 586 ntBASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 PI4KAP1-204ENST00000612579 1703 ntBASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC85AQ96PX6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 MYCLP1-201ENST00000372451 1075 ntBASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 MRPL20P1-201ENST00000400819 433 ntBASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 AL078644.1-201ENST00000609881 752 ntBASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 AL596442.2-201ENST00000610240 980 ntBASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 AC010507.1-201ENST00000633895 436 ntBASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC85AQ96PX6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 AC135050.7-201ENST00000624508 2218 ntBASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC85AQ96PX6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC85AQ96PX6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCDC85AQ96PX6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC85AQ96PX6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.58■■□□□ 1.04
CCDC85AQ96PX6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 PRSS29P-201ENST00000440800 595 ntBASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 DNAJB3-202ENST00000449667 1266 ntBASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC85AQ96PX6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms