Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.5■□□□□ 0.39
SHDQ96IW2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SHDQ96IW2 IGHV3-42-201ENST00000520410 361 ntBASIC17.5■□□□□ 0.39
SHDQ96IW2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.5■□□□□ 0.39
SHDQ96IW2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.5■□□□□ 0.39
SHDQ96IW2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.5■□□□□ 0.39
SHDQ96IW2 AL135744.1-201ENST00000565098 629 ntBASIC17.5■□□□□ 0.39
SHDQ96IW2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SHDQ96IW2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.5■□□□□ 0.39
SHDQ96IW2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.5■□□□□ 0.39
SHDQ96IW2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHDQ96IW2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.49■□□□□ 0.39
SHDQ96IW2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.49■□□□□ 0.39
SHDQ96IW2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.49■□□□□ 0.39
SHDQ96IW2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHDQ96IW2 SLC25A6P2-201ENST00000497974 877 ntBASIC17.49■□□□□ 0.39
SHDQ96IW2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHDQ96IW2 KRT8P23-201ENST00000560090 1207 ntBASIC17.49■□□□□ 0.39
SHDQ96IW2 LINC02560-201ENST00000596379 459 ntBASIC17.49■□□□□ 0.39
SHDQ96IW2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.49■□□□□ 0.39
SHDQ96IW2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.49■□□□□ 0.39
SHDQ96IW2 AC008761.3-201ENST00000624803 892 ntBASIC17.49■□□□□ 0.39
SHDQ96IW2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.49■□□□□ 0.39
SHDQ96IW2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.49■□□□□ 0.39
SHDQ96IW2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SHDQ96IW2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.49■□□□□ 0.39
SHDQ96IW2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHDQ96IW2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.48■□□□□ 0.39
SHDQ96IW2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SHDQ96IW2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SHDQ96IW2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SHDQ96IW2 FAM58DP-201ENST00000428076 619 ntBASIC17.48■□□□□ 0.39
SHDQ96IW2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.48■□□□□ 0.39
SHDQ96IW2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SHDQ96IW2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.48■□□□□ 0.39
SHDQ96IW2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.48■□□□□ 0.39
SHDQ96IW2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SHDQ96IW2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHDQ96IW2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SHDQ96IW2 AC116562.4-201ENST00000641316 2276 ntBASIC17.47■□□□□ 0.39
SHDQ96IW2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.47■□□□□ 0.39
SHDQ96IW2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SHDQ96IW2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.47■□□□□ 0.39
SHDQ96IW2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.47■□□□□ 0.39
SHDQ96IW2 SLC25A39P2-201ENST00000537614 270 ntBASIC17.47■□□□□ 0.39
SHDQ96IW2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.47■□□□□ 0.39
SHDQ96IW2 MIR4515-201ENST00000584082 81 ntBASIC17.47■□□□□ 0.39
SHDQ96IW2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SHDQ96IW2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.47■□□□□ 0.39
SHDQ96IW2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
SHDQ96IW2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms