Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 RCN1P2-201ENST00000398357 915 ntBASIC20.72■□□□□ 0.91
DDX11Q96FC9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 TP73-AS1-210ENST00000637775 1455 ntBASIC20.72■□□□□ 0.91
DDX11Q96FC9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDX11Q96FC9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX11Q96FC9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 AC005336.2-201ENST00000593183 939 ntBASIC20.71■□□□□ 0.91
DDX11Q96FC9 AC008608.2-201ENST00000606089 416 ntBASIC20.71■□□□□ 0.91
DDX11Q96FC9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX11Q96FC9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DDX11Q96FC9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 CROCCP2-202ENST00000412962 2773 ntBASIC20.7■□□□□ 0.9
DDX11Q96FC9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 AF186996.4-201ENST00000467186 377 ntBASIC20.7■□□□□ 0.9
DDX11Q96FC9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DDX11Q96FC9 PKD1P1-201ENST00000458669 6805 ntBASIC20.7■□□□□ 0.9
DDX11Q96FC9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX11Q96FC9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 HLA-J-201ENST00000462773 1622 ntBASIC20.69■□□□□ 0.9
DDX11Q96FC9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 KRT18P67-201ENST00000432816 1264 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms