Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL049597.2-201ENST00000565575 961 ntBASIC15.7■□□□□ 0.1
PTP4A1Q93096 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.7■□□□□ 0.1
PTP4A1Q93096 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 LINC02012-201ENST00000608206 1725 ntBASIC15.7■□□□□ 0.1
PTP4A1Q93096 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PTP4A1Q93096 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A1Q93096 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 AC005915.1-201ENST00000624912 2018 ntBASIC15.69■□□□□ 0.1
PTP4A1Q93096 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 COX5BP2-201ENST00000392354 334 ntBASIC15.69■□□□□ 0.1
PTP4A1Q93096 SLC25A1P3-201ENST00000395415 828 ntBASIC15.69■□□□□ 0.1
PTP4A1Q93096 AC112907.2-201ENST00000448639 330 ntBASIC15.69■□□□□ 0.1
PTP4A1Q93096 AL359075.1-203ENST00000462729 1002 ntBASIC15.69■□□□□ 0.1
PTP4A1Q93096 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.69■□□□□ 0.1
PTP4A1Q93096 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PTP4A1Q93096 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PTP4A1Q93096 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 AC092053.1-201ENST00000605787 1936 ntBASIC15.68■□□□□ 0.1
PTP4A1Q93096 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 PCDHB19P-201ENST00000570871 2371 ntBASIC15.68■□□□□ 0.1
PTP4A1Q93096 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 AC010460.3-201ENST00000511359 1579 ntBASIC15.68■□□□□ 0.1
PTP4A1Q93096 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 KRT18P38-201ENST00000449496 1282 ntBASIC15.68■□□□□ 0.1
PTP4A1Q93096 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 ZNF444P1-201ENST00000559497 298 ntBASIC15.68■□□□□ 0.1
PTP4A1Q93096 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PTP4A1Q93096 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 AC093525.9-201ENST00000624961 1746 ntBASIC15.68■□□□□ 0.1
PTP4A1Q93096 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms