Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.13■■□□□ 1.13
SMARCC1Q92922 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SMARCC1Q92922 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC1Q92922 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC1Q92922 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 AP000997.3-201ENST00000623333 2250 ntBASIC22.12■■□□□ 1.13
SMARCC1Q92922 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC1Q92922 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 DUX4L17-201ENST00000557360 1267 ntBASIC22.12■■□□□ 1.13
SMARCC1Q92922 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 RN7SL204P-201ENST00000582831 262 ntBASIC22.12■■□□□ 1.13
SMARCC1Q92922 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC1Q92922 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC1Q92922 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SMARCC1Q92922 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.12■■□□□ 1.13
SMARCC1Q92922 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC1Q92922 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC1Q92922 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC1Q92922 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.11■■□□□ 1.13
SMARCC1Q92922 RBPMS2P1-201ENST00000437762 623 ntBASIC22.11■■□□□ 1.13
SMARCC1Q92922 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 MMP17-203ENST00000535004 719 ntTSL 3 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC1Q92922 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.11■■□□□ 1.13
SMARCC1Q92922 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC1Q92922 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC1Q92922 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.11■■□□□ 1.13
SMARCC1Q92922 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SMARCC1Q92922 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 SPCS2P4-201ENST00000436160 681 ntBASIC22.1■■□□□ 1.13
SMARCC1Q92922 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 AC125807.1-201ENST00000483097 614 ntBASIC22.1■■□□□ 1.13
SMARCC1Q92922 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 KRT8P23-201ENST00000560090 1207 ntBASIC22.1■■□□□ 1.13
SMARCC1Q92922 AC140878.1-201ENST00000565277 250 ntBASIC22.1■■□□□ 1.13
SMARCC1Q92922 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 REXO1L9P-201ENST00000604264 2108 ntBASIC22.1■■□□□ 1.13
SMARCC1Q92922 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMARCC1Q92922 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.1■■□□□ 1.13
SMARCC1Q92922 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 FAM207CP-201ENST00000443486 507 ntBASIC22.09■■□□□ 1.13
SMARCC1Q92922 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 AC005225.4-201ENST00000557330 545 ntBASIC22.09■■□□□ 1.13
SMARCC1Q92922 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 AC012645.4-201ENST00000610691 1061 ntBASIC22.09■■□□□ 1.13
SMARCC1Q92922 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMARCC1Q92922 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SMARCC1Q92922 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms