Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LETM1P2-201ENST00000597330 2178 ntBASIC17.52■□□□□ 0.39
CHD5Q8TDI0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 AC009947.1-201ENST00000444350 727 ntBASIC17.51■□□□□ 0.39
CHD5Q8TDI0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 AC079776.4-201ENST00000511039 504 ntBASIC17.51■□□□□ 0.39
CHD5Q8TDI0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 GGTLC5P-201ENST00000617623 998 ntBASIC17.51■□□□□ 0.39
CHD5Q8TDI0 AC023511.2-201ENST00000618803 211 ntBASIC17.51■□□□□ 0.39
CHD5Q8TDI0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 MIR574-201ENST00000385209 96 ntBASIC17.51■□□□□ 0.39
CHD5Q8TDI0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHD5Q8TDI0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 MRPL20P1-201ENST00000400819 433 ntBASIC17.5■□□□□ 0.39
CHD5Q8TDI0 AP000347.1-202ENST00000435868 847 ntBASIC17.5■□□□□ 0.39
CHD5Q8TDI0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 AC106730.1-201ENST00000566722 1090 ntBASIC17.5■□□□□ 0.39
CHD5Q8TDI0 AC140113.2-201ENST00000604370 208 ntBASIC17.5■□□□□ 0.39
CHD5Q8TDI0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHD5Q8TDI0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 AC007967.2-201ENST00000432613 625 ntBASIC17.49■□□□□ 0.39
CHD5Q8TDI0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms