Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIN3AQ8TCU5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.8■□□□□ 0.44
GRIN3AQ8TCU5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GRIN3AQ8TCU5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 PMPCAP1-201ENST00000508114 1576 ntBASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 AD001527.2-201ENST00000622994 785 ntBASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 AC073592.5-201ENST00000624854 528 ntBASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GRIN3AQ8TCU5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 RPS2P1-201ENST00000434010 821 ntBASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 AC109462.3-201ENST00000573934 613 ntBASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 AL049840.3-201ENST00000602669 611 ntBASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 AC004817.3-201ENST00000602957 2129 ntBASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 PKD1P1-201ENST00000458669 6805 ntBASIC17.78■□□□□ 0.44
GRIN3AQ8TCU5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 OR6D1P-202ENST00000641007 5290 ntBASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 HNRNPDP1-201ENST00000439535 754 ntBASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 RNA5SP419-201ENST00000515908 135 ntBASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 AC019129.2-201ENST00000609837 1235 ntBASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 AC120114.3-201ENST00000611923 658 ntBASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 MIR7706-201ENST00000613747 67 ntBASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 AL049757.1-201ENST00000616842 1596 ntBASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GRIN3AQ8TCU5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms