Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PSD4Q8NDX1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PSD4Q8NDX1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.52■□□□□ 0.23
PSD4Q8NDX1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PSD4Q8NDX1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 AC008741.2-201ENST00000612792 3115 ntBASIC16.5■□□□□ 0.23
PSD4Q8NDX1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 NUS1P2-201ENST00000417358 873 ntBASIC16.5■□□□□ 0.23
PSD4Q8NDX1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 MTCL1P1-201ENST00000446207 792 ntBASIC16.5■□□□□ 0.23
PSD4Q8NDX1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.5■□□□□ 0.23
PSD4Q8NDX1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 AC011676.5-201ENST00000624864 2660 ntBASIC16.49■□□□□ 0.23
PSD4Q8NDX1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PSD4Q8NDX1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms