Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 PCDH8P1-201ENST00000428983 2773 ntBASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLDN22Q8N7P3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 PCDHA14-201ENST00000506751 2298 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 SPDYE13P-201ENST00000445314 798 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 MTCL1P1-201ENST00000446207 792 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 AP003733.1-201ENST00000491725 852 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 ZNF444P1-201ENST00000559497 298 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 CICP6-201ENST00000457191 2729 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 AC097374.2-201ENST00000618617 1306 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 LINC02012-201ENST00000608206 1725 ntBASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN22Q8N7P3 AC060834.1-201ENST00000443027 2032 ntBASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 MIR662-201ENST00000384847 95 ntBASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 HOMER2P1-201ENST00000455653 964 ntBASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 AC092647.4-201ENST00000457211 535 ntBASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 RNF126P1-202ENST00000569893 925 ntBASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN22Q8N7P3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN22Q8N7P3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms