Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 GPR89P-201ENST00000407924 1495 ntBASIC16.42■□□□□ 0.22
ARHGEF39Q8N4T4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 PP12613-201ENST00000424958 2230 ntBASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 AC092910.1-201ENST00000482027 1129 ntBASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 AC145285.3-201ENST00000564603 959 ntBASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ARHGEF39Q8N4T4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 AC016396.2-201ENST00000562575 1417 ntBASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 AC120114.3-201ENST00000611923 658 ntBASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 AL805961.1-202ENST00000641562 540 ntBASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 BCL2-203ENST00000589955 5011 ntBASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 AC116353.5-201ENST00000638148 1699 ntBASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ARHGEF39Q8N4T4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.39■□□□□ 0.22
ARHGEF39Q8N4T4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ARHGEF39Q8N4T4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms