Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 SPDYE9P-201ENST00000570642 692 ntBASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 SPDYE10P-202ENST00000612005 668 ntBASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 SPDYE8P-202ENST00000612377 668 ntBASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 AL035252.4-201ENST00000624174 288 ntBASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A3Q8N4M1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AC005034.1-201ENST00000426657 489 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AL592309.1-201ENST00000443127 649 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 CNN2P2-201ENST00000443536 909 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 CNN2P3-201ENST00000450201 906 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AC069335.1-201ENST00000489972 472 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AC099522.2-201ENST00000607001 744 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 AL136317.3-201ENST00000618497 906 ntBASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC44A3Q8N4M1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 HCG11-201ENST00000411553 5696 ntBASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 AC129492.6-201ENST00000611383 1305 ntBASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 AC093677.2-201ENST00000600169 1863 ntBASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 AC051619.7-201ENST00000568314 623 ntBASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A3Q8N4M1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC44A3Q8N4M1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC44A3Q8N4M1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms