Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 AL133373.2-201ENST00000623187 2828 ntBASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 AC025580.3-201ENST00000617932 1424 ntBASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 LINC00982-205ENST00000420957 435 ntBASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 AC002558.1-201ENST00000488906 803 ntBASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 OR7E47P-204ENST00000575924 449 ntBASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 AC005332.8-201ENST00000622750 2735 ntBASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SYNPOQ8N3V7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 AC106028.4-201ENST00000614509 607 ntBASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNPOQ8N3V7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 AL513210.1-201ENST00000629608 234 ntBASIC17.65■□□□□ 0.42
SYNPOQ8N3V7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms