Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 MIR4745-201ENST00000577608 62 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 WASH6P-202ENST00000359512 1437 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 RNU1-129P-201ENST00000384064 167 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 AC107890.1-201ENST00000422478 521 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 LINC01225-203ENST00000563550 1244 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 AC005412.3-201ENST00000580309 715 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 U1.21-201ENST00000580816 167 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 AL390754.1-201ENST00000619088 582 ntBASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL27A1Q8IZC6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 FO538757.1-201ENST00000623083 1397 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 SPCS2P4-201ENST00000436160 681 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 FAM207CP-201ENST00000443486 507 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 AL031055.1-201ENST00000606362 631 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 AL035252.4-201ENST00000624174 288 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 AC008761.3-201ENST00000624803 892 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 FOXO1B-201ENST00000504678 1527 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 TUBB3P1-201ENST00000405796 1332 ntBASIC16.21■□□□□ 0.19
COL27A1Q8IZC6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
COL27A1Q8IZC6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
COL27A1Q8IZC6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AL671277.1-201ENST00000429656 993 ntBASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AC026150.2-201ENST00000564693 1156 ntBASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AL158211.3-201ENST00000607385 239 ntBASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AC015922.1-201ENST00000421102 1152 ntBASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AC005237.2-201ENST00000434368 219 ntBASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 RBPMS2P1-201ENST00000437762 623 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms