Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 AC099336.1-202ENST00000602961 463 ntBASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC116Q8IYX3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC116Q8IYX3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 INTS4P1-201ENST00000438455 1935 ntBASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 OR6D1P-203ENST00000641209 4860 ntBASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 POM121L3P-201ENST00000419331 1163 ntBASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 AC016396.2-201ENST00000562575 1417 ntBASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC116Q8IYX3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 SERPINA7P1-201ENST00000443077 631 ntBASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 AC080080.1-201ENST00000625121 2420 ntBASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC116Q8IYX3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms