Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM42Q8IWZ5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 KRT8P47-201ENST00000604727 1398 ntBASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 AC133561.5-201ENST00000635547 218 ntBASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 AC116562.4-202ENST00000641738 218 ntBASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 AC092865.7-201ENST00000641832 219 ntBASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM42Q8IWZ5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 FLJ38576-201ENST00000623820 2459 ntBASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 AC005915.1-201ENST00000624912 2018 ntBASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 LINC02012-201ENST00000608206 1725 ntBASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 ECEL1P3-201ENST00000427961 737 ntBASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 AL390955.1-201ENST00000428694 934 ntBASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 PVRIG2P-201ENST00000435460 978 ntBASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM42Q8IWZ5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM42Q8IWZ5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms