Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 KRT18P1-202ENST00000452408 1331 ntBASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 AC009053.2-201ENST00000563701 2365 ntBASIC17.93■□□□□ 0.46
CDKL3Q8IVW4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 KRT8P10-201ENST00000450021 1447 ntBASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 AC022211.2-201ENST00000585075 2527 ntBASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 STK25P1-201ENST00000585406 838 ntBASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL3Q8IVW4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 PCED1CP-201ENST00000419887 785 ntBASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 AP005901.3-202ENST00000581653 237 ntBASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 AC011467.2-201ENST00000598425 242 ntBASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 AC093525.9-201ENST00000624961 1746 ntBASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 IER3-202ENST00000376377 1350 ntBASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL3Q8IVW4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 AL353593.2-201ENST00000602529 1483 ntBASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 SLC25A1P3-201ENST00000395415 828 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms