Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB43Q86YS6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RAB43Q86YS6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB43Q86YS6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAB43Q86YS6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB43Q86YS6 GPALPP1-207ENST00000611650 899 ntBASIC16.69■□□□□ 0.26
RAB43Q86YS6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB43Q86YS6 AL139288.1-201ENST00000623748 933 ntBASIC16.69■□□□□ 0.26
RAB43Q86YS6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB43Q86YS6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB43Q86YS6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 AL356309.3-201ENST00000624132 1934 ntBASIC16.68■□□□□ 0.26
RAB43Q86YS6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 MIR7706-201ENST00000613747 67 ntBASIC16.68■□□□□ 0.26
RAB43Q86YS6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.68■□□□□ 0.26
RAB43Q86YS6 FAM215A-202ENST00000632077 792 ntBASIC16.68■□□□□ 0.26
RAB43Q86YS6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB43Q86YS6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB43Q86YS6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 GNAS-203ENST00000306120 1878 ntBASIC16.67■□□□□ 0.26
RAB43Q86YS6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB43Q86YS6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 KRT18P58-201ENST00000527480 1120 ntBASIC16.67■□□□□ 0.26
RAB43Q86YS6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB43Q86YS6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms