Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 AC010947.1-201ENST00000623454 693 ntBASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 OR6D1P-203ENST00000641209 4860 ntBASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 KRT8P9-201ENST00000558927 1449 ntBASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM1Q86UE6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 HMGA1P5-201ENST00000412453 271 ntBASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 TSPY12P-201ENST00000421279 868 ntBASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AC002558.1-201ENST00000488906 803 ntBASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AL355075.4-201ENST00000554988 638 ntBASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRTM1Q86UE6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 AP000523.1-201ENST00000398242 1049 ntBASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 AC079602.3-201ENST00000623931 403 ntBASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRTM1Q86UE6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms