Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LDB1Q86U70 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LDB1Q86U70 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LDB1Q86U70 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB1Q86U70 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LDB1Q86U70 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LDB1Q86U70 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.41■□□□□ 0.38
LDB1Q86U70 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LDB1Q86U70 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LDB1Q86U70 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.41■□□□□ 0.38
LDB1Q86U70 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.41■□□□□ 0.38
LDB1Q86U70 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
LDB1Q86U70 AC104819.1-201ENST00000504587 486 ntBASIC17.41■□□□□ 0.38
LDB1Q86U70 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.41■□□□□ 0.38
LDB1Q86U70 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 AC099336.1-202ENST00000602961 463 ntBASIC17.41■□□□□ 0.38
LDB1Q86U70 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.41■□□□□ 0.38
LDB1Q86U70 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LDB1Q86U70 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.41■□□□□ 0.38
LDB1Q86U70 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LDB1Q86U70 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LDB1Q86U70 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB1Q86U70 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 AC020916.1-201ENST00000587762 1774 ntBASIC17.4■□□□□ 0.38
LDB1Q86U70 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB1Q86U70 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.4■□□□□ 0.38
LDB1Q86U70 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
LDB1Q86U70 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB1Q86U70 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB1Q86U70 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.4■□□□□ 0.38
LDB1Q86U70 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.4■□□□□ 0.38
LDB1Q86U70 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.4■□□□□ 0.38
LDB1Q86U70 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.4■□□□□ 0.38
LDB1Q86U70 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB1Q86U70 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LDB1Q86U70 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB1Q86U70 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB1Q86U70 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LDB1Q86U70 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.39■□□□□ 0.38
LDB1Q86U70 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LDB1Q86U70 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
LDB1Q86U70 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
LDB1Q86U70 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LDB1Q86U70 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.39■□□□□ 0.38
LDB1Q86U70 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LDB1Q86U70 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.39■□□□□ 0.37
LDB1Q86U70 INTS4P1-201ENST00000438455 1935 ntBASIC17.39■□□□□ 0.37
LDB1Q86U70 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LDB1Q86U70 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.39■□□□□ 0.37
LDB1Q86U70 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms